The detailed information of tRNA gene sequence


Sequence ID>A171006496
Genome IDCP013050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus CH5 [CP013050]
Start position on genome 228407
End posion on genome 228332
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
attgggctgt
tRNA gene sequence 
GCCGCCGTAGCTTAGTTGGTAGAGCGCGCGGCTGTTAACCGCGTGGTCCCCCGTTCGAGT
CGGGGCGGCGGCGCCA
Downstream region at tRNA end position 
acagttttat
Secondary structure (Cloverleaf model)
>A171006496	Asn	GTT
                   t      GCCA acagttttat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       T T C G       C C C C G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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