The detailed information of tRNA gene sequence


Sequence ID>A171006626
Genome IDCP015363
Search identical group
Phylum/ClassUnclassified
SpeciesFerroplasma acidiphilum Y [CP015363]
Start position on genome 1555346
End posion on genome 1555418
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acagactaag
tRNA gene sequence 
GGGCTTGTGGTCCAGTGGTTATGACGCTTCCCTCACACGGAAGAAATCGCCGGTTCAAAT
CCGGCCAGGCCCAttt
Downstream region at tRNA end position 
aattttcagg
Secondary structure (Cloverleaf model)
>A171006626	Val	CAC
                   g      Attt aattttcagg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     A
    G       C C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AAATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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