The detailed information of tRNA gene sequence


Sequence ID>A171006682
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 186565
End posion on genome 186636
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agagggaggc
tRNA gene sequence 
GGGCCCATAGCTCAGTGGGAGAGCGCCGCCTTTGCAAGGCGGAGGCCCTGGGTTCGAATC
CCAGTGGGTCCAtcc
Downstream region at tRNA end position 
cgggttcgga
Secondary structure (Cloverleaf model)
>A171006682	Ala	TGC
                   c      Atcc cgggttcgga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G A C C C     A
        G A        A      | | | | |     G
      T     C T C G       C T G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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