The detailed information of tRNA gene sequence


Sequence ID>A171006687
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 663108
End posion on genome 663192
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cgttccgatc
tRNA gene sequence 
GCGTGGGTAGCCAAGCTAGGTCAAAGGCGCAGCGTTGAGGGCGCTGTCCCGTAGGGGTTC
GCCGGTTCGAATCCGGTCCCACGCAttt
Downstream region at tRNA end position 
tcagcgactc
Secondary structure (Cloverleaf model)
>A171006687	Leu	GAG
                   c      Attt tcagcgactc
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    T C G A        A      + | | | |     G
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGTAGGGGTTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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