The detailed information of tRNA gene sequence


Sequence ID>A171006697
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1568034
End posion on genome 1568108
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atgtaggtgt
tRNA gene sequence 
GGGCCGGTAGCTCAGGTAGGCAGAGCGTCTGGCTTTTAACCAGACGGACGGGGGTTCAAA
TCCCTCCCGGCCCGCtt
Downstream region at tRNA end position 
ctgcgacgaa
Secondary structure (Cloverleaf model)
>A171006697	Lys	TTT
                   t      GCtt ctgcgacgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      G G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     CGGAC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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