The detailed information of tRNA gene sequence


Sequence ID>A171006706
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1664099
End posion on genome 1664025
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctccggtacT
tRNA gene sequence 
GGGTTCGTGGTCTAGTGGTTATGACGCGTCCCTTACAAGGACGAGATCGGCGGTTCGAAT
CCGCCCGAACCCATtt
Downstream region at tRNA end position 
gcagcgactc
Secondary structure (Cloverleaf model)
>A171006706	Val	TAC
                   T      ATtt gcagcgactc
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G G C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGATC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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