The detailed information of tRNA gene sequence


Sequence ID>A171006707
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1543545
End posion on genome 1543470
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
attgttccga
tRNA gene sequence 
GGGCCCGTAGCTCAGTTTGGATAGAGTACTTGGTTCCGGACCAAGATGTCAGGGGTTCAA
ATCCCCTCGGGTCCGCtt
Downstream region at tRNA end position 
ctgcgacgaa
Secondary structure (Cloverleaf model)
>A171006707	Arg	CCG
                   a      GCtt ctgcgacgaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      | | | | |     A
  T         C T C G       A G G G G     C
  G         | | | +                 T T
  G         G A G T
    A T A          A     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.-

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