The detailed information of tRNA gene sequence


Sequence ID>A171006708
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1422795
End posion on genome 1422721
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gagagtgcac
tRNA gene sequence 
CCGCCCTTAGCTCAGACTGGTAGAGCAGCCGACTGTAGATCGGCTTGTCCCCCGTTCAAA
TCGGGGAGGGCGGACtt
Downstream region at tRNA end position 
ttgctgcgaa
Secondary structure (Cloverleaf model)
>A171006708	Tyr	GTA
                   c      ACtt ttgctgcgaa
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G G G C     A
      A G A        A      | | | | |     A
    C       C T C G       C C C C G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TTGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.-

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