The detailed information of tRNA gene sequence


Sequence ID>A171006711
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 996352
End posion on genome 996277
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgtgatgat
tRNA gene sequence 
AGCGGGATGGGATAGCCTGGAGATTCCGCCGGCCTCATGAGCCGGAGAGCGGTGGTTCAA
ATCCACCTCCCGCTACtt
Downstream region at tRNA end position 
ctttccgttc
Secondary structure (Cloverleaf model)
>A171006711	Met	CAT
                   t      ACtt ctttccgttc
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A C C     A
    C C G A        G      | | | | |     A
  T         T A G G       G G T G G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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