The detailed information of tRNA gene sequence


Sequence ID>A171006715
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 678308
End posion on genome 678222
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agacgagtgC
tRNA gene sequence 
GGTGAGGTAGCGAAGCGGCCCAACGCGCCTGCCTTGAGAGCAGGTGGCTATCATAGCCTC
AGGGGTTCAAATCCCCTCCTCACCGTtt
Downstream region at tRNA end position 
tgcgacgagc
Secondary structure (Cloverleaf model)
>A171006715	Ser	TGA
                   C      GTtt tgcgacgagc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    G       A G C G       A G G G G     C
    G         | | |                 T T
    C       A C G C
      C C A        G     TGGCTATCATAGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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