The detailed information of tRNA gene sequence


Sequence ID>A171006717
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 458138
End posion on genome 458064
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ggaagcacga
tRNA gene sequence 
GGGTCGGTGGTCTAGTCTGGCTATGACACCTCCTTGACATGGAGGAGACCGGCGGTTCGA
ATCCGCCCCGACCCAttt
Downstream region at tRNA end position 
tcagcgattc
Secondary structure (Cloverleaf model)
>A171006717	Val	GAC
                   a      Attt tcagcgattc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C C G C C     A
    C T G A        G      | | | | |     G
  T         T C T G       G G C G G     C
  G           | | |                 T T
  G         T G A C
    C T A          A     AGACC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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