The detailed information of tRNA gene sequence


Sequence ID>A171006718
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 437718
End posion on genome 437645
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccccgagtgc
tRNA gene sequence 
GGGACCGTGGGGTAGCTTGGTATCCTCGGCGCCTGGGGGGCGTCGGACTTGAGTTCGAAT
CTCAACGGTCCCACtt
Downstream region at tRNA end position 
ttggaagaac
Secondary structure (Cloverleaf model)
>A171006718	Pro	GGG
                   c      ACtt ttggaagaac
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     A A C T C     A
      C G A        G      | | | | |     G
    T       T G G G       T T G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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