The detailed information of tRNA gene sequence


Sequence ID>A171006740
Genome IDCP016804
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HSR6 [CP016804]
Start position on genome 1821172
End posion on genome 1821246
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcacgggca
tRNA gene sequence 
GGGCCCTTAGCTCAGTCTGGTTAGAGCGCGCGGCTCATAACCGCGTCGTCAGTGGTTCAA
ATCCGCTAGGGCCCAttt
Downstream region at tRNA end position 
cttcgagcga
Secondary structure (Cloverleaf model)
>A171006740	Met	CAT
                   a      Attt cttcgagcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C G C C     A
    C T G A        A      | | + | |     A
  T         C T C G       A G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TCGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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