The detailed information of tRNA gene sequence


Sequence ID>A171006751
Genome IDCP016804
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HSR6 [CP016804]
Start position on genome 1041728
End posion on genome 1041655
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
atggttgcgt
tRNA gene sequence 
GCCGGTGTAGCTCAGACTGGTAGAGCGAATCCTTCGTAAGGATTAGGTCAAGGGTTCAAA
TCCCTTCACCGGCTtcg
Downstream region at tRNA end position 
ttctcaaatt
Secondary structure (Cloverleaf model)
>A171006751	Thr	CGT
                   t      Ttcg ttctcaaatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
      A G A        A      | | | | |     A
    C       C T C G       A A G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    A - T
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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