The detailed information of tRNA gene sequence


Sequence ID>A171006875
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2243902
End posion on genome 2243831
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagtaagcca
tRNA gene sequence 
GGGTATGTGGTCCAATGGAAAGACGCTCGCTTCCAGAGCGAGAGACGGCTGTTCGATTCG
GTCCATACCCACtc
Downstream region at tRNA end position 
cgcggtagct
Secondary structure (Cloverleaf model)
>A171006875	Trp	CCA
                   a      ACtc cgcggtagct
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     T - A
                     G - C          T T
                    T     C T G G C     A
        A A        G      | + | + |     G
      T     C C T G       G G C T G     C
      G       | | |                 T T
      G     A G A C
        A A        G     AGAC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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