The detailed information of tRNA gene sequence


Sequence ID>A171006878
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2243632
End posion on genome 2243548
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctgtcatcgT
tRNA gene sequence 
GTCGCCGTACCCAAGTGGCCGAAGGGGCGCGGCTCAGGACCGCGTGCTTAGTGCTTTCCG
GGGTTCGACTCCTCGCGGCGACATtc
Downstream region at tRNA end position 
gatgctagga
Secondary structure (Cloverleaf model)
>A171006878	Leu	CAG
                   T      ATtc gatgctagga
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T C
                    T     G C T C C     A
      T G A        A      | | + | |     G
    G       A C C C       C G G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGCTTAGTGCTTTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.-

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