The detailed information of tRNA gene sequence


Sequence ID>A171006882
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2242763
End posion on genome 2242693
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggctggagca
tRNA gene sequence 
TGCGGGATAGGGTAGCGGTAGCCCACGGGGCTCATATCCCCGAGGCCCAGGTTCGACTCC
TGGTCCCGCAAtgg
Downstream region at tRNA end position 
tgggtagtct
Secondary structure (Cloverleaf model)
>A171006882	Met	CAT
                   a      Atgg tgggtagtct
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     G G T C C     A
        G A        A      | | | | |     G
      C     T G G G       C C A G G     C
      G     + | | |                 T T
      G     G C C C
        T A        A     AGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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