The detailed information of tRNA gene sequence


Sequence ID>A171006884
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2242616
End posion on genome 2242542
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccgccaatcc
tRNA gene sequence 
GGGTGCGTACCTCAGTTGGTCAGAGAGATCCGCTGATAACGGATTCGTCGGAGGTTCGAG
TCCTCCCGTGCCCACtc
Downstream region at tRNA end position 
aggacgcatg
Secondary structure (Cloverleaf model)
>A171006884	Ile	GAT
                   c      ACtc aggacgcatg
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T
                     C - G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C C       G G A G G     C
    G       | | |                   T T
    G       G A G A
      T C A        G     TCGTC
                    A - T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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