The detailed information of tRNA gene sequence


Sequence ID>A171006888
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2241545
End posion on genome 2241474
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ccggccctgc
tRNA gene sequence 
GCCTGTGTAGCTCAATTGGCAGAGCACATCCGTGGTATGGATGCCGTCCAGGTTCGACTC
CTGGCGCAGGCTtca
Downstream region at tRNA end position 
ggcctagccc
Secondary structure (Cloverleaf model)
>A171006888	Thr	GGT
                   c      Ttca ggcctagccc
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     T + G
                     G - C          T C
                    T     G G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CCGT
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  G       T
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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