The detailed information of tRNA gene sequence


Sequence ID>A171006897
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 889091
End posion on genome 889007
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttgggtga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGTTGCTTCGAGAGCAACTGTCCTCACGGACTC
AGGAGTTCAAATCTCCTCCTCGGCGtca
Downstream region at tRNA end position 
ttttcgcggt
Secondary structure (Cloverleaf model)
>A171006897	Ser	CGA
                   a      Gtca ttttcgcggt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       A G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCTCACGGACTC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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