The detailed information of tRNA gene sequence


Sequence ID>A171007047
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1522154
End posion on genome 1522079
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tctattattT
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGTGCCCCGTTGGCATCGGGGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCATgt
Downstream region at tRNA end position 
tgctaattga
Secondary structure (Cloverleaf model)
>A171007047	Ala	GGC
                   T      ATgt tgctaattga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | +                 T T
    G       G A G T
      G A A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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