The detailed information of tRNA gene sequence


Sequence ID>A171007048
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1482026
End posion on genome 1481940
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tattaaacgT
tRNA gene sequence 
GCCGAGGTGCCCGAGCGGACTAAGGGGTCGGTCTGGAGAACCGATGGGGGAAACCCCACA
CGGGTTCAAATCCCGTCCTCGGCGTCt
Downstream region at tRNA end position 
cattttaact
Secondary structure (Cloverleaf model)
>A171007048	Ser	GGA
                   T      GTCt cattttaact
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       A C G G G     C
    G         | | |                 T T
    A       A G G G
      C T A        G     TGGGGGAAACCCCAC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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