The detailed information of tRNA gene sequence


Sequence ID>A171007064
Genome IDCP021324
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosomarinus catalina SPOT01 [CP021324]
Start position on genome 1170291
End posion on genome 1170206
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatatttttT
tRNA gene sequence 
GCCGAGGTCGCTTAGTCCGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCAAATCCCTCTCTCGGCGTtt
Downstream region at tRNA end position 
acttttctat
Secondary structure (Cloverleaf model)
>A171007064	Ser	TGA
                   T      GTtt acttttctat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | + | | |     A
    C       T T C G       G G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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