The detailed information of tRNA gene sequence


Sequence ID>A171007084
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 101321
End posion on genome 101398
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccactcaaac
tRNA gene sequence 
GCCCGGGTGGTGTAGCCAGGCCCATCATACGGGACTGTCACTCCCGTGACTCGGGTTCAA
ATCCCGACCCGGGCGCCA
Downstream region at tRNA end position 
tacaaccctt
Secondary structure (Cloverleaf model)
>A171007084	Asp	GTC
                   c      GCCA tacaaccctt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     A G C C C     A
    C C G A        G      | | | | |     A
  A         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C C A        A     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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