The detailed information of tRNA gene sequence


Sequence ID>A171007086
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 194115
End posion on genome 194201
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgcgtgtat
tRNA gene sequence 
GCCGGGATCGCCTAGCCTGGGATGGCGCGGGCCTTGAGAGCCCGTGTCCGCTTGGACACC
GGGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position 
aaatcctcta
Secondary structure (Cloverleaf model)
>A171007086	Ser	TGA
                   t      GCCA aaatcctcta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       C G G G G     C
    T         | | |                 T T
    G       T G G C
      G G A        G     TGTCCGCTTGGACAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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