The detailed information of tRNA gene sequence


Sequence ID>A171007088
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 198108
End posion on genome 198185
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acatttctgg
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGTCTATCCTCCCGGCTTGGGGTGCCGGAGACCCGGGTTCAA
ATCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
aaatttgcac
Secondary structure (Cloverleaf model)
>A171007088	Pro	GGG
                   g      ACCA aaatttgcac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     A
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    T C T A        C     AGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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