The detailed information of tRNA gene sequence


Sequence ID>A171007091
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 324440
End posion on genome 324525
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcactggagt
tRNA gene sequence 
GCCGCGGTAGCCTAGCCTGGTAGGGCGCCGGCCTGCTAAGCCGGTGGCCGTTGGCCACAG
GGGTTCAAATCCCCTCCGCGGCGCCA
Downstream region at tRNA end position 
aaatctttct
Secondary structure (Cloverleaf model)
>A171007091	Ser	GCT
                   t      GCCA aaatctttct
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     A
    C       T C C G       A G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGGCCGTTGGCCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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