The detailed information of tRNA gene sequence


Sequence ID>A171007092
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 324547
End posion on genome 324621
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gggttcaaat
tRNA gene sequence 
GCCGGGATAGCCTAGAGGTGAGGCGGTGGACTGCAGATCCGCTTTACGGGGGTTCGAATC
CCCCTCCCGGCTCCA
Downstream region at tRNA end position 
taacaaactt
Secondary structure (Cloverleaf model)
>A171007092	Cys	GCA
                   t      TCCA taacaaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
        G A        A      | | | | |     G
      A     T C C G       G G G G G     C
      G     | | | |                 T T
      G     A G G C
        T G        G     TTTAC
                    G - C
                    T + G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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