The detailed information of tRNA gene sequence


Sequence ID>A171007116
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 774037
End posion on genome 773961
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aacatcgggt
tRNA gene sequence 
GCCGGGGTAGCCTAGCTCGGCAGGGCGGCGGACTCGTAATCCGCAGGTCGCGGGTTCAAA
TCCCGCTCCCGGCTCCA
Downstream region at tRNA end position 
caattgtcct
Secondary structure (Cloverleaf model)
>A171007116	Thr	CGT
                   t      TCCA caattgtcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       T C C G       G C G G G     C
    C       + | | |                 T T
    G       G G G C
      G C A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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