The detailed information of tRNA gene sequence


Sequence ID>A171007140
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 96288
End posion on genome 96359
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgatatatgc
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGAGCGCGGGTTCAAATC
CCGCCTCAGGCTttc
Downstream region at tRNA end position 
tcccccttct
Secondary structure (Cloverleaf model)
>A171007140	Thr	GGT
                   c      Tttc tcccccttct
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      C     T T C G       G C G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGAGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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