The detailed information of tRNA gene sequence


Sequence ID>A171007159
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 2937098
End posion on genome 2937026
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttataataga
tRNA gene sequence 
GGGATCGTGGGTTAGCTTGGTATACTCCGGGCCTTGGGTGCCCGTGACCCCGGTTCGAAT
CCGGGCGATCCCAtat
Downstream region at tRNA end position 
agtactgatc
Secondary structure (Cloverleaf model)
>A171007159	Pro	TGG
                   a      Atat agtactgatc
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    T       T T G G       C C C G G     C
    T         | | +                 T T
    G       T A C T
      G T A        C     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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