The detailed information of tRNA gene sequence


Sequence ID>A171007162
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 2411822
End posion on genome 2411738
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aataagcata
tRNA gene sequence 
GGTGGGATGGCGGAGTGGACTAACGCGCCTGCCTTGAGAGCAGGTGGCCATATGGCCTCC
TGGGTTCAAATCCCAGTCCCACCGCat
Downstream region at tRNA end position 
gcgtttcttc
Secondary structure (Cloverleaf model)
>A171007162	Ser	TGA
                   a      GCat gcgtttcttc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G G C G       C T G G G     C
    G         | | |                 T T
    A       A C G C
      C T A        G     TGGCCATATGGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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