The detailed information of tRNA gene sequence


Sequence ID>A171007172
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 780479
End posion on genome 780407
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agtgataagt
tRNA gene sequence 
GCCGGTGTAGCTCAGCTGGAAGAGCGATTCCTTCGTAAGGAATAGGTCGAGAGTTCAAGT
CTCTCCACCGGCTtac
Downstream region at tRNA end position 
gatcggcttc
Secondary structure (Cloverleaf model)
>A171007172	Thr	CGT
                   t      Ttac gatcggcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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