The detailed information of tRNA gene sequence


Sequence ID>A171007176
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 433841
End posion on genome 433761
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttaaataga
tRNA gene sequence 
GCCGGAATGGCCGAGTGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTCTGGGATCCAGG
GTTCAAATCCCTGTTCCGGCGttt
Downstream region at tRNA end position 
tcttgttatt
Secondary structure (Cloverleaf model)
>A171007176	Ser	GGA
                   a      Gttt tcttgttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T C C C     A
        G A        G      | | | | |     A
      T     G C C G       C A G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTCTGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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