The detailed information of tRNA gene sequence


Sequence ID>A171007177
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 358762
End posion on genome 358678
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatatatcaa
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGTCAAGGCGGCAGATTCGAAATCTGCTGTCCGTTCGGACAC
GTGAGTTCAAATCTCACCCTCGGCGttg
Downstream region at tRNA end position 
caaatattct
Secondary structure (Cloverleaf model)
>A171007177	Ser	CGA
                   a      Gttg caaatattct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       G T G A G     C
  G         | | | |                 T T
  G         A G G C
    T C A          G     TGTCCGTTCGGACAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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