The detailed information of tRNA gene sequence


Sequence ID>A171007192
Genome IDHE964772
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoculleus bourgensis MS2 MS2T [HE964772]
Start position on genome 1494590
End posion on genome 1494663
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgatgcatg
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGAAGATCCTGAGTTCGAA
TCTCAGCGGGCCCAtcc
Downstream region at tRNA end position 
cgattctcct
Secondary structure (Cloverleaf model)
>A171007192	Val	CAC
                   g      Atcc cgattctcct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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