The detailed information of tRNA gene sequence


Sequence ID>A171007231
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 1706060
End posion on genome 1706134
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aatcgagtga
tRNA gene sequence 
GGGCCGGTAGCTCAGTCAGGCAGAGCGTCTGGCTTTTAACCAGACGGTCATGGGTTCAAT
TCCCATCCGGCCCGCta
Downstream region at tRNA end position 
ttgcgacgaa
Secondary structure (Cloverleaf model)
>A171007231	Lys	TTT
                   a      GCta ttgcgacgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     T A C C C     A
      T G A        A      | | | | |     A
    C       C T C G       A T G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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