The detailed information of tRNA gene sequence


Sequence ID>A171007244
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 2707519
End posion on genome 2707444
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatggggt
tRNA gene sequence 
AGCGGGATGGGATAGCTAGGAGATTCCGGCGGGCTCATAACCCGCAGATCGGTGGTTCAA
ATCCACCTCCCGCTACta
Downstream region at tRNA end position 
ttttgctgcg
Secondary structure (Cloverleaf model)
>A171007244	Met	CAT
                   t      ACta ttttgctgcg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A C C     A
    T C G A        G      | | | | |     A
  A         T A G G       G G T G G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGATC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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