The detailed information of tRNA gene sequence


Sequence ID>A171007246
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 2297059
End posion on genome 2296977
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtgaccgcga
tRNA gene sequence 
GTCGTGGTAGCCAAGCGGCCCAAGGCGCATGGTTGCTAACCATGTGGCGTAAAGCCTCCG
GGGTTCGAATCCCCGCCACGACGttt
Downstream region at tRNA end position 
cacgagatca
Secondary structure (Cloverleaf model)
>A171007246	Ser	GCT
                   a      Gttt cacgagatca
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    G       A C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TGGCGTAAAGCCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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