The detailed information of tRNA gene sequence


Sequence ID>A171007521
Genome IDLN999010
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus chitonophagus [LN999010]
Start position on genome 1282327
End posion on genome 1282250
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aacggtttgt
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGCCTAGGACGCCACCCTGCCAAGGTGGAGACCCGGGTTCAA
ATCCCGGCCACCGCACCA
Downstream region at tRNA end position 
caacttttct
Secondary structure (Cloverleaf model)
>A171007521	Gly	GCC
                   t      ACCA caacttttct
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     AGAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.-

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