The detailed information of tRNA gene sequence


Sequence ID>A172000002
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 1495532
End posion on genome 1495624
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttctaccca
tRNA gene sequence 
GCCCCGGTAGCTCAGCCTGGTGGAGCGCCTCACTGGTAATGGCGGTCAGCCGCCTAGTGA
GGAGGTCCCGGGTTCGAATCCCGGCCGGGGCTCtg
Downstream region at tRNA end position 
gcttcccatt
Secondary structure (Cloverleaf model)
>A172000002	Thr	GGT
                   a      TCtg gcttcccatt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     GTCAGCCGCCTAGTGAGGAGGTC
                    C - G
                    C   C
                    T + G
                    C - G
                    A - T
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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