The detailed information of tRNA gene sequence


Sequence ID>A172000015
Genome IDCP002100
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa DSM 14429 [CP002100]
Start position on genome 1737093
End posion on genome 1737180
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gcattgactt
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGTAGAGCGGCGGGCTGTTAACCCTGCAGGAACCCGTAGGTC
CCGGGTTCAAATCCCGGCGGCGGCGCCA
Downstream region at tRNA end position 
acacggttgt
Secondary structure (Cloverleaf model)
>A172000015	Asn	GTT
                   t      GCCA acacggttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     CAGGAACCCGTAGGTC
                    G   G
                    C   T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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