The detailed information of tRNA gene sequence


Sequence ID>A172000058
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 995006
End posion on genome 994922
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggctcagtgT
tRNA gene sequence 
GCCGTGTCTGGGGAATGGTGACCCCACTGGCCTGCTACGCCAGTCCCTGCGATGGGTTCC
CGGTTCGACTCCGGGACACGGCGTga
Downstream region at tRNA end position 
tgacatccaa
Secondary structure (Cloverleaf model)
>A172000058	Ser	GCT
                   T      GTga tgacatccaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    C     G G G C C     A
      T A A        T      | | | | |     G
    G       G G G G       C C C G G     C
    G       | | | |                 T T
    T       C C C C
      G A          A     TCCCTGCGATGGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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