The detailed information of tRNA gene sequence


Sequence ID>A17A000020
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 2006417
End posion on genome 2006509
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tacgcaaaaa
tRNA gene sequence 
CCCGCCTTAGCTCAGCCTGGTTAGAGCGGTCGGCTGTAAACCGACAGGTCCCCGATTCGA
ATTCGGGAGGCGGGACat
Downstream region at tRNA end position 
ttcccctttg
Secondary structure (Cloverleaf model)
>A17A000020	Tyr	GTA
                   a      ACat ttcccctttg
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G G G C T     A
    C C G A        A      | | | | |     G
  T         C T C G       C C C G A     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G - C
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T*A
intron: position=36, length=17 (in A-loop)
AGACCTTACGACTGCGG
Intron
Comment/Decision
Genome/Seq. Info.-

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