The detailed information of tRNA gene sequence


Sequence ID>A17A000030
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 160080
End posion on genome 159959
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggcatgtagg
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGCTAGGATGCGGGGTTCGGGACCCCGTGGTCCGGGGTTCAA
ATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
ttagatcaga
Secondary structure (Cloverleaf model)
>A17A000030	Pro	CGG
                   g      ACCA ttagatcaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  T*      A
                  T       G
                    C G G
intron: position=33, length=44 (in A-loop)
ACGGAGCAGAAGGTCCCGCTGGGGGGCGGGAGGCTCCGCCCGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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