The detailed information of tRNA gene sequence


Sequence ID>A17A000035
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 413108
End posion on genome 412998
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cactggggga
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGCAGAGCGGCGGACTCCAGACCCGTAGGTCGGGGGTTCAAA
TCCCCCCGGGCCCACCA
Downstream region at tRNA end position 
cacccccccg
Secondary structure (Cloverleaf model)
>A17A000035	Trp	CCA
                   a      ACCA cacccccccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G G G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                   *A   C
                  C       A
                  T       G
                    C C A
intron: position=32, length=34
CCCCGCATAGGCCCCCACTAGCGGGAGGCCGAGG
Intron
Comment/Decision
Genome/Seq. Info.-

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