The detailed information of tRNA gene sequence


Sequence ID>A17A000094
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 1060884
End posion on genome 1061035
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acctgcaccg
tRNA gene sequence 
GGGGTCGTGGCCTAGTCCGGAATGGCGACGGGCTCCAGACCCGTCGATCGTGAGTTCAAA
TCTCACCGACCCCACgt
Downstream region at tRNA end position 
ttttcaacga
Secondary structure (Cloverleaf model)
>A17A000094	Trp	CCA
                   g      ACgt ttttcaacga
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    C       T C C G       G T G A G     C
    C         | | |                 T T
    G       T G G C
      G A A        G     CGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C*A
intron: position=36, length=77 (in A-loop)
AGCGGTCTTGTGCGTGTGATGAACAATGGGTCTGCTGAATTGGTGATGACCCGTTGGAGCTCTGACGCAT
ATCGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK