The detailed information of tRNA gene sequence


Sequence ID>A17A000163
Genome IDCP001402
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus M.16.4 [CP001402]
Start position on genome 1893178
End posion on genome 1893091
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
attgtttctc
tRNA gene sequence 
GCCGGAGTAGCTCAGTTGGCAGAGCGCCCGGCTGTAAACCGGGTGGTCGGAGGTTCGAGT
CCTCCCTCCGGCGCtt
Downstream region at tRNA end position 
tattatttct
Secondary structure (Cloverleaf model)
>A17A000163	Tyr	GTA
                   c      GCtt tattatttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     TGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T*A
intron: position=36, length=14 (in A-loop)
TATGCCGGGTGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

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