The detailed information of tRNA gene sequence


Sequence ID>A17A000254
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 110959
End posion on genome 110854
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttcccttggt
tRNA gene sequence 
GGGCCCGTAGTCCAGTCTGGCAGGATGCGGGGTTCGGGTCCCTGTGGTCGGGGGTTCAAA
TCCCCCCGGGCCCACCA
Downstream region at tRNA end position 
gttgcttctg
Secondary structure (Cloverleaf model)
>A17A000254	Pro	CGG
                   t      ACCA gttgcttctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    C       C C T G       G G G G G     C
    T       | | | +                 T T
    G       G G A T
      G C A        G     TGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    G - C
                  T*      T
                  T       G
                    C G G
intron: position=33, length=29 (in A-loop)
ACGCCAATGCCGAGGACTTGGCGCCCGAC
Intron
Comment/Decision
Genome/Seq. Info.-

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