The detailed information of tRNA gene sequence


Sequence ID>A17A000256
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 374925
End posion on genome 375013
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtctactgga
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGTCCAAGGCGGCGGGCTGCAGACCCGTTAACTCCCGGGTTCGA
ATCCCGGCCCCGGCTCCA
Downstream region at tRNA end position 
ctcagaggct
Secondary structure (Cloverleaf model)
>A17A000256	Cys	GCA
                   a      TCCA ctcagaggct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TAACTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C*A
intron: position=36, length=11 (in A-loop)
AGTGGCTGCGG
Intron
Comment/Decision
Genome/Seq. Info.-

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